Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | BCL90_1890 | Not Available | Negative | 2193954 - 2194862 | 33534.2 |
| atp synthase f1 subcomplex beta subunit | BCL90_1891 | Not Available | Positive | 2195024 - 2196526 | 54177.1 |
| atp synthase f1 subcomplex epsilon subunit | BCL90_1892 | Not Available | Positive | 2196612 - 2196857 | 8702.62 |
| hypothetical protein | BCL90_1893 | Not Available | Positive | 2197390 - 2197524 | 4767.11 |
| branched-chain amino acid aminotransferase | BCL90_1894 | Not Available | Positive | 2197651 - 2198541 | 33189.8 |
| putative o-methyltransferase yrrm | BCL90_1895 | Not Available | Positive | 2198659 - 2199237 | 21331.3 |
| dihydroxyacid dehydratase | BCL90_1896 | Not Available | Positive | 2199470 - 2201152 | 59537.8 |
| orf6n domain-containing protein | BCL90_1897 | Not Available | Positive | 2201199 - 2201789 | 22823.6 |
| acetolactate synthase large subunit | BCL90_1898 | Not Available | Positive | 2201811 - 2203562 | 64065.0 |
| acetolactate synthase small subunit | BCL90_1899 | Not Available | Positive | 2203691 - 2204329 | 24492.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
