Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41a family c-terminal processing peptidase-3 | BCL90_1879 | Not Available | Negative | 2178798 - 2180429 | 59562.1 |
| ahpc/tsa family protein | BCL90_1880 | Not Available | Negative | 2180434 - 2182425 | 75673.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_1881 | Not Available | Negative | 2182437 - 2183807 | 51302.0 |
| tonb-linked susc/raga family outer membrane protein | BCL90_1882 | Not Available | Negative | 2183813 - 2187418 | 131917.0 |
| fecr family protein | BCL90_1883 | Not Available | Negative | 2187558 - 2188742 | 43567.5 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1884 | Not Available | Negative | 2188844 - 2189422 | 22524.1 |
| hypothetical protein | BCL90_1885 | Not Available | Negative | 2189784 - 2190323 | 20322.5 |
| spi protease inhibitor | BCL90_1886 | Not Available | Negative | 2190346 - 2191638 | 48134.3 |
| Trna-arg | Not Available | Not Available | Positive | 2193211 - 2193287 | Not Available |
| peroxiredoxin | BCL90_1889 | Not Available | Negative | 2193387 - 2193851 | 16954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
