Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-dependent phosphoinositide phospholipase c | BCL90_1869 | Not Available | Negative | 2164921 - 2165985 | 39903.7 |
| putative outer membrane starch-binding protein | BCL90_1870 | Not Available | Negative | 2165996 - 2167585 | 59814.4 |
| iron complex outermembrane receptor protein | BCL90_1871 | Not Available | Negative | 2167597 - 2170584 | 108982.0 |
| hypothetical protein | BCL90_1872 | Not Available | Positive | 2171152 - 2171886 | 25836.4 |
| hypothetical protein | BCL90_1873 | Not Available | Positive | 2172012 - 2172740 | 27538.0 |
| two-component system copper resistance phosphate regulon response regulator cusr | BCL90_1874 | Not Available | Positive | 2172737 - 2173420 | 25420.0 |
| signal transduction histidine kinase | BCL90_1875 | Not Available | Positive | 2173421 - 2174755 | 49830.0 |
| putative mfs family arabinose efflux permease | BCL90_1876 | Not Available | Positive | 2174919 - 2176136 | 42421.1 |
| arsenite efflux membrane protein arsb | BCL90_1877 | Not Available | Positive | 2176265 - 2177509 | 44130.5 |
| peroxiredoxin | BCL90_1878 | Not Available | Negative | 2177639 - 2178787 | 42484.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
