Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible protein a | BCL90_1859 | Not Available | Positive | 2149057 - 2150406 | 49924.7 |
| non-processive endocellulase | BCL90_1860 | Not Available | Negative | 2150698 - 2152455 | 64561.6 |
| carbohydrate binding protein | BCL90_1861 | Not Available | Negative | 2152460 - 2153008 | 20052.4 |
| ipt/tig domain-containing protein | BCL90_1862 | Not Available | Negative | 2153365 - 2154477 | 39262.4 |
| putative outer membrane starch-binding protein | BCL90_1863 | Not Available | Negative | 2154484 - 2156061 | 57632.1 |
| tonb-linked susc/raga family outer membrane protein | BCL90_1864 | Not Available | Negative | 2156085 - 2159558 | 127528.0 |
| fecr family protein | BCL90_1865 | Not Available | Negative | 2159761 - 2160924 | 42811.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1866 | Not Available | Negative | 2161040 - 2161624 | 22894.6 |
| php domain-containing protein | BCL90_1867 | Not Available | Negative | 2162161 - 2163333 | 43503.4 |
| alkaline phosphatase | BCL90_1868 | Not Available | Negative | 2163510 - 2164979 | 54128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
