Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas/pac sensor signal transduction histidine kinase | BCL90_1839 | Not Available | Positive | 2123708 - 2125459 | 66154.8 |
| acyl-coa hydrolase | BCL90_1840 | Not Available | Negative | 2125584 - 2126060 | 17831.9 |
| putative redox protein | BCL90_1841 | Not Available | Negative | 2126515 - 2126895 | 13893.8 |
| ytxh-like protein | BCL90_1842 | Not Available | Positive | 2127135 - 2127500 | 13243.9 |
| uncharacterized sam-binding protein ycdf (duf218 family) | BCL90_1843 | Not Available | Positive | 2127602 - 2128351 | 28288.9 |
| gtp-binding protein | BCL90_1844 | Not Available | Negative | 2128425 - 2129420 | 35797.2 |
| adenylate kinase | BCL90_1845 | Not Available | Negative | 2129576 - 2130151 | 21228.4 |
| uncharacterized protein duf4142 | BCL90_1846 | Not Available | Negative | 2130701 - 2131252 | 20932.4 |
| alcohol dehydrogenase | BCL90_1847 | Not Available | Negative | 2131532 - 2132689 | 41854.6 |
| 4-alpha-glucanotransferase/malto- oligosyltrehalose synthase,tigr02401 | BCL90_1848 | Not Available | Negative | 2132946 - 2136998 | 156150.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
