Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase/thioredoxin | BCL90_1829 | Not Available | Negative | 2111374 - 2111952 | 21736.8 |
| susd/ragb-like outer membrane lipoprotein | BCL90_1830 | Not Available | Negative | 2112012 - 2113730 | 63690.7 |
| iron complex outermembrane receptor protein | BCL90_1831 | Not Available | Negative | 2113757 - 2117062 | 120211.0 |
| signal peptidase i | BCL90_1832 | Not Available | Negative | 2117422 - 2118615 | 45458.6 |
| dihydrodipicolinate reductase | BCL90_1833 | Not Available | Negative | 2118748 - 2119482 | 27224.4 |
| hypothetical protein | BCL90_1834 | Not Available | Negative | 2119602 - 2120327 | 26893.7 |
| parb family chromosome partitioning protein | BCL90_1835 | Not Available | Negative | 2120327 - 2121235 | 34005.1 |
| chromosome segregation atpase | BCL90_1836 | Not Available | Negative | 2121243 - 2122046 | 29508.8 |
| nad(p)h-dependent fmn reductase | BCL90_1837 | Not Available | Positive | 2122227 - 2122748 | 19723.7 |
| hypothetical protein | BCL90_1838 | Not Available | Positive | 2122906 - 2123130 | 8667.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
