Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase/peptide methionine sulfoxide reductase msra/msrb | BCL90_1808 | Not Available | Negative | 2084951 - 2085454 | 18615.2 |
| succinyl-coa synthetase alpha subunit | BCL90_1809 | Not Available | Negative | 2085803 - 2086675 | 29909.5 |
| cupin domain-containing protein | BCL90_1810 | Not Available | Positive | 2087209 - 2087634 | 15291.6 |
| 23s rrna m(6)a-1618 methyltransferase | BCL90_1811 | Not Available | Negative | 2088020 - 2089036 | 38364.6 |
| hypothetical protein | BCL90_1812 | Not Available | Positive | 2089069 - 2089257 | 7228.92 |
| aerobic c4-dicarboxylate transport protein | BCL90_1813 | Not Available | Negative | 2089336 - 2090622 | 46115.1 |
| beta-aspartyl-peptidase (threonine type) | BCL90_1814 | Not Available | Negative | 2090686 - 2091711 | 36163.6 |
| atp-binding cassette subfamily b protein | BCL90_1815 | Not Available | Negative | 2091769 - 2093538 | 66694.7 |
| trna pseudouridine38-40 synthase | BCL90_1816 | Not Available | Negative | 2093661 - 2094413 | 28291.1 |
| uncharacterized protein duf4293 | BCL90_1817 | Not Available | Positive | 2094673 - 2095083 | 14848.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
