Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase-like protein | BCL90_1798 | Not Available | Positive | 2072166 - 2072900 | 27604.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | BCL90_1799 | Not Available | Negative | 2073011 - 2073754 | 26446.0 |
| putative enzyme related to lactoylglutathione lyase | BCL90_1800 | Not Available | Negative | 2073819 - 2074187 | 14176.0 |
| agmatine deiminase | BCL90_1801 | Not Available | Negative | 2074197 - 2075273 | 40571.9 |
| n-carbamoylputrescine amidase | BCL90_1802 | Not Available | Negative | 2075449 - 2076324 | 32966.9 |
| putative membrane protein yqik | BCL90_1803 | Not Available | Negative | 2076742 - 2078700 | 71234.9 |
| cysteine-rich cwc | BCL90_1804 | Not Available | Negative | 2079249 - 2079470 | 8350.02 |
| ribonucleoside-diphosphate reductase alpha chain | BCL90_1805 | Not Available | Negative | 2079645 - 2082029 | 89304.6 |
| ribonucleoside-diphosphate reductase beta chain | BCL90_1806 | Not Available | Negative | 2082176 - 2083147 | 37343.4 |
| rare lipoprotein a | BCL90_1807 | Not Available | Negative | 2084426 - 2084806 | 14065.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
