Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1778 | Not Available | Positive | 2050740 - 2052197 | 54364.6 |
| uncharacterized protein duf1080 | BCL90_1779 | Not Available | Positive | 2052249 - 2052929 | 25260.1 |
| nucleoside transporter | BCL90_1780 | Not Available | Positive | 2053083 - 2054321 | 45382.4 |
| hydroxypyruvate isomerase | BCL90_1781 | Not Available | Positive | 2054323 - 2055213 | 33129.8 |
| sugar phosphate isomerase/epimerase | BCL90_1782 | Not Available | Positive | 2055224 - 2056096 | 32052.6 |
| secreted protein | BCL90_1783 | Not Available | Positive | 2056108 - 2056977 | 32063.2 |
| aspartate-semialdehyde dehydrogenase | BCL90_1784 | Not Available | Positive | 2057688 - 2058677 | 36329.2 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | BCL90_1785 | Not Available | Positive | 2058737 - 2059339 | 22635.4 |
| hypothetical protein | BCL90_1786 | Not Available | Positive | 2059482 - 2060606 | 43010.1 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | BCL90_1787 | Not Available | Positive | 2060626 - 2062032 | 51046.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
