Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | BCL90_1768 | Not Available | Negative | 2038328 - 2039272 | 35479.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1769 | Not Available | Positive | 2039567 - 2040127 | 21892.3 |
| fecr family protein | BCL90_1770 | Not Available | Positive | 2040233 - 2041255 | 38444.9 |
| outer membrane receptor protein involved in fe transport | BCL90_1771 | Not Available | Positive | 2041451 - 2044381 | 107271.0 |
| secreted protein | BCL90_1772 | Not Available | Positive | 2044429 - 2045334 | 33456.9 |
| gluconate 2-dehydrogenase subunit 3-like protein | BCL90_1773 | Not Available | Positive | 2045612 - 2046196 | 21444.9 |
| choline dehydrogenase-like flavoprotein | BCL90_1774 | Not Available | Positive | 2046222 - 2047922 | 64139.0 |
| putative dehydrogenase | BCL90_1775 | Not Available | Positive | 2048007 - 2049164 | 42141.6 |
| sugar phosphate isomerase/epimerase | BCL90_1776 | Not Available | Positive | 2049174 - 2050226 | 39506.5 |
| cytochrome c | BCL90_1777 | Not Available | Positive | 2050321 - 2050707 | 13958.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
