Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0176 protein | BCL90_1758 | Not Available | Positive | 2021351 - 2022286 | 35030.7 |
| yxyxy domain-containing protein | BCL90_1759 | Not Available | Positive | 2022534 - 2025413 | 110177.0 |
| tonb-linked susc/raga family outer membrane protein | BCL90_1760 | Not Available | Positive | 2025778 - 2028789 | 109030.0 |
| putative outer membrane starch-binding protein | BCL90_1761 | Not Available | Positive | 2028801 - 2030273 | 54270.8 |
| hypothetical protein | BCL90_1762 | Not Available | Positive | 2030336 - 2031709 | 52007.6 |
| hypothetical protein | BCL90_1763 | Not Available | Positive | 2031768 - 2032178 | 14570.6 |
| glycosyl hydrolase family 43 | BCL90_1764 | Not Available | Positive | 2032194 - 2033948 | 66780.6 |
| beta-glucosidase | BCL90_1765 | Not Available | Positive | 2034103 - 2036400 | 83282.1 |
| phospholipase/carboxylesterase | BCL90_1766 | Not Available | Positive | 2036605 - 2037387 | 29571.9 |
| yebc/pmpr family dna-binding regulatory protein | BCL90_1767 | Not Available | Negative | 2037498 - 2038226 | 27226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
