Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase small subunit | BCL90_1748 | Not Available | Positive | 2009715 - 2010827 | 40963.8 |
| abc-2 type transport system atp-binding protein | BCL90_1749 | Not Available | Positive | 2011041 - 2011805 | 28533.4 |
| abc-2 type transport system permease protein | BCL90_1750 | Not Available | Positive | 2011983 - 2013059 | 39225.1 |
| fic family protein | BCL90_1751 | Not Available | Positive | 2013174 - 2014130 | 36674.1 |
| hypothetical protein | BCL90_1752 | Not Available | Positive | 2014186 - 2014869 | 25640.5 |
| tetr family transcriptional regulator | BCL90_1753 | Not Available | Negative | 2015152 - 2015727 | 22067.6 |
| hypothetical protein | BCL90_1754 | Not Available | Negative | 2015729 - 2016139 | 14344.4 |
| phenylalanyl-trna synthetase alpha subunit | BCL90_1755 | Not Available | Negative | 2016139 - 2017179 | 39459.1 |
| 2-amino-3-ketobutyrate coenzyme a ligase | BCL90_1756 | Not Available | Negative | 2017328 - 2018515 | 43392.3 |
| carboxypeptidase-like protein | BCL90_1757 | Not Available | Positive | 2018767 - 2021214 | 93640.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
