Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1738 | Not Available | Positive | 2001361 - 2001921 | 21911.2 |
| hypothetical protein | BCL90_1739 | Not Available | Positive | 2001955 - 2002608 | 24738.6 |
| hypothetical protein | BCL90_1740 | Not Available | Positive | 2002616 - 2003056 | 17273.2 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | BCL90_1741 | Not Available | Positive | 2003126 - 2004316 | 43479.0 |
| dna-binding response ompr family regulator | BCL90_1742 | Not Available | Positive | 2004370 - 2005047 | 26045.3 |
| signal transduction histidine kinase | BCL90_1743 | Not Available | Positive | 2005157 - 2006467 | 49981.2 |
| hypothetical protein | BCL90_1744 | Not Available | Positive | 2006612 - 2007085 | 17002.3 |
| hypothetical protein | BCL90_1745 | Not Available | Negative | 2007210 - 2007638 | 15397.1 |
| ribosomal large subunit pseudouridine synthase d | BCL90_1746 | Not Available | Negative | 2007750 - 2008436 | 26061.5 |
| ketopantoate hydroxymethyltransferase | BCL90_1747 | Not Available | Negative | 2008586 - 2009401 | 29575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
