Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter (apc superfamily) | BCL90_1728 | Not Available | Positive | 1990877 - 1992826 | 70859.8 |
| rep element-mobilizing transposase rayt | BCL90_1729 | Not Available | Positive | 1992830 - 1993384 | 21250.5 |
| hypothetical protein | BCL90_1730 | Not Available | Negative | 1993423 - 1993575 | 5404.0 |
| kup system potassium uptake protein | BCL90_1731 | Not Available | Negative | 1993580 - 1995538 | 73624.4 |
| putative secreted protein (por secretion system target) | BCL90_1732 | Not Available | Positive | 1995719 - 1996249 | 19516.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | BCL90_1733 | Not Available | Positive | 1996325 - 1996936 | 23105.7 |
| peptidase m23-like protein | BCL90_1734 | Not Available | Positive | 1996940 - 1998673 | 64069.1 |
| peroxiredoxin q/bcp | BCL90_1735 | Not Available | Positive | 1998878 - 1999342 | 17143.2 |
| transketolase | BCL90_1736 | Not Available | Positive | 1999400 - 2000245 | 30551.2 |
| transketolase | BCL90_1737 | Not Available | Positive | 2000318 - 2001274 | 34459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
