Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | BCL90_1708 | Not Available | Negative | 1967674 - 1969575 | 72513.7 |
| glutamate racemase | BCL90_1709 | Not Available | Negative | 1970295 - 1971110 | 30432.5 |
| periplasmic chaperone for outer membrane proteins skp | BCL90_1710 | Not Available | Negative | 1971354 - 1971932 | 20469.5 |
| periplasmic chaperone for outer membrane proteins skp | BCL90_1711 | Not Available | Negative | 1971996 - 1972526 | 20461.5 |
| beta-barrel assembly machine subunit bama | BCL90_1712 | Not Available | Negative | 1972626 - 1975169 | 95355.5 |
| undecaprenyl diphosphate synthase | BCL90_1713 | Not Available | Negative | 1975319 - 1976059 | 28238.7 |
| hypothetical protein | BCL90_1714 | Not Available | Negative | 1976079 - 1976891 | 30582.2 |
| nad+ kinase | BCL90_1715 | Not Available | Negative | 1976894 - 1977775 | 32863.3 |
| cbs domain protein | BCL90_1716 | Not Available | Negative | 1977785 - 1978447 | 24691.1 |
| pimeloyl-acp methyl ester carboxylesterase | BCL90_1717 | Not Available | Negative | 1978448 - 1979212 | 29033.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
