Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple antibiotic resistance protein | BCL90_1698 | Not Available | Positive | 1957531 - 1958112 | 21190.0 |
| hypothetical protein | BCL90_1699 | Not Available | Positive | 1958171 - 1958416 | 9419.4 |
| 16s rrna (cytosine967-c5)-methyltransferase | BCL90_1700 | Not Available | Negative | 1959074 - 1960243 | 44506.5 |
| hypothetical protein | BCL90_1701 | Not Available | Negative | 1960274 - 1961485 | 45950.5 |
| gmp synthase (glutamine-hydrolysing) | BCL90_1702 | Not Available | Negative | 1961590 - 1963119 | 56442.6 |
| pin domain nuclease of toxin-antitoxin system | BCL90_1703 | Not Available | Negative | 1963304 - 1963702 | 15150.5 |
| hypothetical protein | BCL90_1704 | Not Available | Negative | 1963699 - 1963926 | 8248.97 |
| dcmp deaminase | BCL90_1705 | Not Available | Negative | 1964079 - 1964537 | 16378.5 |
| fhs family l-fucose permease-like mfs transporter | BCL90_1706 | Not Available | Negative | 1964601 - 1966037 | 51145.4 |
| threonine/homoserine/homoserine lactone efflux protein | BCL90_1707 | Not Available | Positive | 1966181 - 1966807 | 23018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
