Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1688 | Not Available | Negative | 1943485 - 1944480 | 38776.0 |
| uncharacterized protein involved in type vi secretion and phage assembly | BCL90_1689 | Not Available | Negative | 1944486 - 1946279 | 65574.1 |
| type vi secretion system (t6ss) effector tae4 (amidase) | BCL90_1690 | Not Available | Negative | 1946301 - 1946885 | 22477.7 |
| hypothetical protein | BCL90_1691 | Not Available | Negative | 1946887 - 1947432 | 20238.7 |
| hypothetical protein | BCL90_1692 | Not Available | Negative | 1947561 - 1947956 | 14600.2 |
| hypothetical protein | BCL90_1693 | Not Available | Negative | 1948238 - 1948633 | 14631.4 |
| amino acid/polyamine/organocation transporter (apc superfamily) | BCL90_1694 | Not Available | Negative | 1950366 - 1951808 | 52406.5 |
| k(+)-stimulated pyrophosphate-energized sodium pump | BCL90_1695 | Not Available | Positive | 1952199 - 1954445 | 78538.7 |
| amino acid/polyamine/organocation transporter (apc superfamily) | BCL90_1696 | Not Available | Positive | 1954561 - 1956036 | 52327.0 |
| hypothetical protein | BCL90_1697 | Not Available | Positive | 1956135 - 1957466 | 50392.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
