Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1678 | Not Available | Negative | 1934374 - 1934592 | 8295.28 |
| hypothetical protein | BCL90_1679 | Not Available | Positive | 1934806 - 1935279 | 17586.3 |
| ligand-binding srpbcc domain-containing protein | BCL90_1680 | Not Available | Positive | 1935920 - 1936387 | 18065.8 |
| uncharacterized protein with tbp-like fold duf4468 | BCL90_1681 | Not Available | Negative | 1936398 - 1936976 | 21919.4 |
| putative ompl-like beta-barrel porin-2 | BCL90_1682 | Not Available | Negative | 1937074 - 1938099 | 36172.8 |
| ammonium transporter | BCL90_1683 | Not Available | Negative | 1938136 - 1939542 | 49782.5 |
| hypothetical protein | BCL90_1684 | Not Available | Negative | 1939889 - 1940836 | 36049.1 |
| tetratricopeptide repeat-containing protein | BCL90_1685 | Not Available | Negative | 1940966 - 1941469 | 19063.9 |
| hypothetical protein | BCL90_1686 | Not Available | Negative | 1941731 - 1942285 | 21972.4 |
| uncharacterized protein duf4280 | BCL90_1687 | Not Available | Negative | 1942296 - 1943510 | 44369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
