Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf5126 | BCL90_1668 | Not Available | Negative | 1918769 - 1919971 | 44605.8 |
| putative outer membrane starch-binding protein | BCL90_1669 | Not Available | Negative | 1919996 - 1921984 | 75672.7 |
| tonb-linked susc/raga family outer membrane protein | BCL90_1670 | Not Available | Negative | 1921986 - 1925237 | 119233.0 |
| atp-binding cassette chvd family protein | BCL90_1671 | Not Available | Positive | 1926010 - 1927689 | 62686.4 |
| hypothetical protein | BCL90_1672 | Not Available | Negative | 1927901 - 1928287 | 14798.5 |
| hypothetical protein | BCL90_1673 | Not Available | Negative | 1928306 - 1928653 | 13053.6 |
| lysophospholipase l1-like esterase | BCL90_1674 | Not Available | Negative | 1929220 - 1929954 | 28112.2 |
| outer membrane receptor protein involved in fe transport | BCL90_1675 | Not Available | Negative | 1930011 - 1932701 | 99262.2 |
| uncharacterized protein duf1456 | BCL90_1676 | Not Available | Negative | 1932685 - 1932918 | 8877.81 |
| atp-independent rna helicase dbpa | BCL90_1677 | Not Available | Negative | 1933019 - 1934323 | 48736.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
