Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative intracellular protease/amidase | BCL90_1615 | Not Available | Negative | 1853419 - 1854156 | 26879.6 |
| hypothetical protein | BCL90_1616 | Not Available | Negative | 1854166 - 1854312 | 5742.11 |
| hypothetical protein | BCL90_1617 | Not Available | Positive | 1854506 - 1854688 | 6378.75 |
| hypothetical protein | BCL90_1618 | Not Available | Negative | 1854835 - 1855164 | 12218.3 |
| hypothetical protein | BCL90_1619 | Not Available | Positive | 1855413 - 1856240 | 31013.9 |
| iclr family transcriptional regulator | BCL90_1620 | Not Available | Negative | 1856720 - 1857493 | 28538.7 |
| beta-galactosidase | BCL90_1621 | Not Available | Positive | 1857768 - 1860461 | 100621.0 |
| hypothetical protein | BCL90_1622 | Not Available | Positive | 1860472 - 1860684 | 7921.74 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | BCL90_1623 | Not Available | Positive | 1860686 - 1861846 | 43309.5 |
| crotonobetainyl-coa:carnitine coa-transferase caib-like acyl-coa transferase | BCL90_1624 | Not Available | Positive | 1861843 - 1862994 | 42051.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
