Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1595 | Not Available | Positive | 1830454 - 1832235 | 67420.8 |
| pas/pac sensor signal transduction histidine kinase | BCL90_1596 | Not Available | Positive | 1832291 - 1833493 | 45148.1 |
| crp-like camp-binding protein | BCL90_1597 | Not Available | Positive | 1833504 - 1834535 | 38579.2 |
| d-lactate dehydrogenase | BCL90_1598 | Not Available | Positive | 1835067 - 1835492 | 15237.5 |
| oxygen-independent coproporphyrinogen-3 oxidase | BCL90_1599 | Not Available | Positive | 1835495 - 1836841 | 50860.0 |
| cu+-exporting atpase | BCL90_1600 | Not Available | Positive | 1836854 - 1839238 | 88892.5 |
| cbb3-type cytochrome oxidase maturation protein | BCL90_1601 | Not Available | Positive | 1839235 - 1839414 | 6689.93 |
| cytochrome c oxidase cbb3-type subunit i/ii | BCL90_1602 | Not Available | Positive | 1839487 - 1841628 | 80991.9 |
| hypothetical protein | BCL90_1603 | Not Available | Positive | 1841632 - 1841814 | 7040.65 |
| cytochrome c oxidase cbb3-type subunit 3 | BCL90_1604 | Not Available | Positive | 1841801 - 1842769 | 35794.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
