Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l35 | BCL90_1585 | Not Available | Positive | 1820056 - 1820256 | 7345.23 |
| lsu ribosomal protein l20p | BCL90_1586 | Not Available | Positive | 1820332 - 1820676 | 12995.0 |
| cbs domain-containing protein | BCL90_1587 | Not Available | Negative | 1821032 - 1822483 | 55243.7 |
| dna polymerase-3 subunit epsilon | BCL90_1588 | Not Available | Negative | 1822473 - 1823150 | 26625.1 |
| glycerol uptake facilitator protein | BCL90_1589 | Not Available | Negative | 1823685 - 1824425 | 25702.9 |
| glycerol kinase | BCL90_1590 | Not Available | Negative | 1824623 - 1826113 | 54385.2 |
| glycerol-3-phosphate dehydrogenase | BCL90_1591 | Not Available | Negative | 1826128 - 1827720 | 58758.6 |
| deor family transcriptional regulator | BCL90_1592 | Not Available | Positive | 1827837 - 1828643 | 29567.3 |
| two-component system phosphate regulon response regulator phob | BCL90_1593 | Not Available | Positive | 1828687 - 1829076 | 14855.8 |
| nadph2:quinone reductase | BCL90_1594 | Not Available | Negative | 1829143 - 1830156 | 37171.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
