Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1574 | Not Available | Negative | 1805282 - 1805545 | 10059.2 |
| imidazolonepropionase-like amidohydrolase | BCL90_1575 | Not Available | Negative | 1805837 - 1809064 | 119309.0 |
| atp-dependent dna helicase recq | BCL90_1577 | Not Available | Positive | 1810164 - 1812056 | 71584.5 |
| umf1 family mfs transporter | BCL90_1578 | Not Available | Positive | 1812167 - 1813474 | 48380.4 |
| l-lactate dehydrogenase complex protein llde | BCL90_1579 | Not Available | Positive | 1813499 - 1814236 | 27473.7 |
| glpgli family protein | BCL90_1580 | Not Available | Positive | 1814658 - 1815545 | 32246.7 |
| peptidoglycan/lps o-acetylase oafa/yrhl | BCL90_1581 | Not Available | Positive | 1815735 - 1816826 | 41296.7 |
| hypothetical protein | BCL90_1582 | Not Available | Positive | 1816903 - 1817397 | 18741.6 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | BCL90_1583 | Not Available | Positive | 1817514 - 1819439 | 73092.2 |
| translation initiation factor 3 (bif-3) | BCL90_1584 | Not Available | Positive | 1819457 - 1820026 | 21453.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
