Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gxxexxy protein | BCL90_1564 | Not Available | Positive | 1794775 - 1795158 | 14662.0 |
| holliday junction dna helicase subunit ruvb | BCL90_1565 | Not Available | Negative | 1795303 - 1796325 | 37537.1 |
| 3-hydroxybutyryl-coa dehydrogenase | BCL90_1566 | Not Available | Negative | 1796357 - 1797250 | 32216.2 |
| pyridoxamine 5'-phosphate oxidase | BCL90_1567 | Not Available | Negative | 1797349 - 1797999 | 24876.6 |
| putative transcriptional regulator | BCL90_1568 | Not Available | Positive | 1798046 - 1798609 | 21214.1 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | BCL90_1569 | Not Available | Negative | 1798789 - 1799295 | 17610.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | BCL90_1570 | Not Available | Negative | 1799381 - 1800520 | 42483.4 |
| hypothetical protein | BCL90_1571 | Not Available | Positive | 1800575 - 1801765 | 43606.4 |
| hypothetical protein | BCL90_1572 | Not Available | Negative | 1802011 - 1802727 | 27844.3 |
| radical sam superfamily enzyme ygiq (upf0313 family) | BCL90_1573 | Not Available | Positive | 1802912 - 1805128 | 84470.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
