Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein ybjt (duf2867 family) | BCL90_1554 | Not Available | Positive | 1782343 - 1783791 | 55001.9 |
| hypothetical protein | BCL90_1555 | Not Available | Positive | 1783829 - 1783951 | 4719.87 |
| transglutaminase-like putative cysteine protease | BCL90_1556 | Not Available | Negative | 1783989 - 1785896 | 72214.0 |
| transglutaminase superfamily protein | BCL90_1557 | Not Available | Negative | 1785897 - 1787858 | 75028.5 |
| dna polymerase-3 subunit epsilon | BCL90_1558 | Not Available | Positive | 1788041 - 1788994 | 36299.4 |
| gxxexxy protein | BCL90_1559 | Not Available | Positive | 1789043 - 1789345 | 11422.8 |
| hypothetical protein | BCL90_1560 | Not Available | Positive | 1789469 - 1791328 | 70215.7 |
| epoxyqueuosine reductase | BCL90_1561 | Not Available | Negative | 1791805 - 1792788 | 37472.6 |
| hypothetical protein | BCL90_1562 | Not Available | Positive | 1792875 - 1793081 | 7492.99 |
| putative amidohydrolase | BCL90_1563 | Not Available | Negative | 1793145 - 1794653 | 57718.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
