Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease-8 | BCL90_1543 | Not Available | Negative | 1773251 - 1773988 | 28928.5 |
| ktsc domain-containing protein | BCL90_1544 | Not Available | Negative | 1773990 - 1774193 | 7761.56 |
| hypothetical protein | BCL90_1545 | Not Available | Negative | 1774239 - 1774619 | 15231.8 |
| hypothetical protein | BCL90_1546 | Not Available | Positive | 1774732 - 1774920 | 6869.13 |
| hypothetical protein | BCL90_1548 | Not Available | Positive | 1775578 - 1776390 | 30733.7 |
| protein of unknown function (duf3037) | BCL90_1549 | Not Available | Positive | 1776368 - 1776751 | 14667.8 |
| putative dna helicase | BCL90_1550 | Not Available | Positive | 1776925 - 1778838 | 71582.3 |
| dna topoisomerase-3 | BCL90_1551 | Not Available | Negative | 1778840 - 1780693 | 69176.0 |
| hypothetical protein | BCL90_1552 | Not Available | Positive | 1780896 - 1781348 | 17446.4 |
| l,d-transpeptidase-like protein | BCL90_1553 | Not Available | Negative | 1781345 - 1782130 | 28894.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
