Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | BCL90_1533 | Not Available | Positive | 1764534 - 1765835 | 48224.2 |
| hypothetical protein | BCL90_1534 | Not Available | Negative | 1765953 - 1766396 | 17289.1 |
| dna polymerase-3 subunit epsilon | BCL90_1535 | Not Available | Negative | 1766410 - 1767783 | 51680.0 |
| hypothetical protein | BCL90_1536 | Not Available | Negative | 1767910 - 1768539 | 22499.6 |
| two-component system phosphate regulon response regulator phob/two-component system alkaline phosphatase synthesis response regulator phop | BCL90_1537 | Not Available | Negative | 1768550 - 1768921 | 14437.5 |
| dna-binding lytr/algr family response regulator | BCL90_1538 | Not Available | Negative | 1769025 - 1769783 | 28268.3 |
| hypothetical protein | BCL90_1539 | Not Available | Positive | 1770181 - 1770456 | 10484.6 |
| dna-binding transcriptional merr regulator | BCL90_1540 | Not Available | Positive | 1770786 - 1771691 | 34918.9 |
| phytoene/squalene synthetase | BCL90_1541 | Not Available | Positive | 1771675 - 1772511 | 32170.2 |
| isopentenyl-diphosphate delta-isomerase | BCL90_1542 | Not Available | Positive | 1772512 - 1773054 | 20688.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
