Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | BCL90_1521 | Not Available | Positive | 1755451 - 1756209 | 27556.1 |
| cob(i)alamin adenosyltransferase | BCL90_1522 | Not Available | Positive | 1756292 - 1756840 | 20877.4 |
| uncharacterized protein duf2795 | BCL90_1523 | Not Available | Positive | 1756926 - 1757147 | 8601.69 |
| hypothetical protein | BCL90_1524 | Not Available | Positive | 1757317 - 1757475 | 5497.28 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BCL90_1525 | Not Available | Negative | 1757968 - 1758633 | 24946.9 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | BCL90_1526 | Not Available | Negative | 1758692 - 1759741 | 39804.0 |
| putative abc transport system permease protein | BCL90_1527 | Not Available | Positive | 1759942 - 1761186 | 45865.7 |
| aspartate aminotransferase | BCL90_1530 | Not Available | Negative | 1761793 - 1762989 | 43768.1 |
| cation diffusion facilitator family transporter | BCL90_1531 | Not Available | Positive | 1763103 - 1764089 | 36885.0 |
| nudix domain-containing protein | BCL90_1532 | Not Available | Positive | 1764076 - 1764528 | 17420.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
