Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | BCL90_1508 | Not Available | Negative | 1743167 - 1744783 | 60053.5 |
| glpgli family protein | BCL90_1509 | Not Available | Negative | 1744943 - 1745704 | 29213.4 |
| hypothetical protein | BCL90_1511 | Not Available | Negative | 1748631 - 1749107 | 18436.2 |
| hypothetical protein | BCL90_1512 | Not Available | Negative | 1749132 - 1749674 | 20639.7 |
| marr family transcriptional regulator with acetyltransferase activity | BCL90_1513 | Not Available | Positive | 1749942 - 1750895 | 36188.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | BCL90_1514 | Not Available | Negative | 1751012 - 1751800 | 29200.0 |
| deoxyadenosine/deoxycytidine kinase | BCL90_1516 | Not Available | Negative | 1752064 - 1752678 | 23723.3 |
| tryptophanyl-trna synthetase | BCL90_1517 | Not Available | Negative | 1752757 - 1753755 | 37576.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | BCL90_1519 | Not Available | Positive | 1754318 - 1755043 | 28086.2 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | BCL90_1520 | Not Available | Positive | 1755047 - 1755337 | 11096.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
