Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | BCL90_1498 | Not Available | Negative | 1729146 - 1729604 | 17382.0 |
| putative permease | BCL90_1499 | Not Available | Positive | 1729970 - 1732378 | 90785.2 |
| iron complex outermembrane receptor protein | BCL90_1500 | Not Available | Positive | 1732879 - 1735335 | 90908.8 |
| uncharacterized protein (tigr00369 family) | BCL90_1501 | Not Available | Positive | 1735483 - 1736058 | 21738.4 |
| hypothetical protein | BCL90_1502 | Not Available | Positive | 1736159 - 1736398 | 9229.96 |
| spore maturation protein spma | BCL90_1503 | Not Available | Negative | 1736664 - 1737935 | 45395.0 |
| hypothetical protein | BCL90_1504 | Not Available | Negative | 1737935 - 1738096 | 6260.44 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | BCL90_1505 | Not Available | Negative | 1738195 - 1741053 | 107181.0 |
| hypothetical protein | BCL90_1506 | Not Available | Positive | 1741177 - 1741308 | 4811.0 |
| yidc/oxa1 family membrane protein insertase | BCL90_1507 | Not Available | Negative | 1741341 - 1743146 | 68049.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
