Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4440 | BCL90_1478 | Not Available | Positive | 1708433 - 1708855 | 15691.4 |
| hypothetical protein | BCL90_1479 | Not Available | Negative | 1708989 - 1709393 | 15048.2 |
| dna topoisomerase i | BCL90_1480 | Not Available | Negative | 1709487 - 1712051 | 96396.3 |
| glutathione peroxidase | BCL90_1481 | Not Available | Positive | 1712605 - 1713117 | 19272.3 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | BCL90_1482 | Not Available | Negative | 1713470 - 1714306 | 31239.1 |
| dna-binding marr family transcriptional regulator | BCL90_1483 | Not Available | Negative | 1714353 - 1714796 | 16926.7 |
| transmembrane secretion effector | BCL90_1484 | Not Available | Positive | 1714967 - 1716196 | 44739.8 |
| laci family transcriptional regulator | BCL90_1485 | Not Available | Negative | 1716400 - 1717437 | 39196.1 |
| beta-glucuronidase | BCL90_1486 | Not Available | Positive | 1717690 - 1719519 | 70111.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCL90_1487 | Not Available | Positive | 1719584 - 1720408 | 29219.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
