Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | BCL90_1467 | Not Available | Negative | 1692148 - 1693137 | 36825.2 |
| aldose 1-epimerase | BCL90_1468 | Not Available | Positive | 1693504 - 1694676 | 42985.9 |
| had superfamily hydrolase (tigr01509 family) | BCL90_1469 | Not Available | Negative | 1694750 - 1695415 | 24882.6 |
| undecaprenyl-diphosphatase | BCL90_1470 | Not Available | Negative | 1695512 - 1696144 | 24226.5 |
| hypothetical protein | BCL90_1471 | Not Available | Positive | 1696277 - 1697320 | 39078.8 |
| putative zincin peptidase | BCL90_1472 | Not Available | Positive | 1697336 - 1697866 | 19338.0 |
| putative membrane protein yhhn | BCL90_1473 | Not Available | Positive | 1698293 - 1698985 | 26234.0 |
| penicillin-binding protein 1c | BCL90_1475 | Not Available | Negative | 1699269 - 1701650 | 89045.3 |
| hypothetical protein | BCL90_1476 | Not Available | Negative | 1702001 - 1702444 | 17710.2 |
| hypothetical protein | BCL90_1477 | Not Available | Negative | 1702628 - 1708219 | 207367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
