Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf3606 | BCL90_1457 | Not Available | Negative | 1681491 - 1681769 | 10930.4 |
| uncharacterized protein duf3606 | BCL90_1458 | Not Available | Positive | 1682166 - 1682339 | 6415.4 |
| bifunctional non-homologous end joining protein ligd | BCL90_1459 | Not Available | Positive | 1682350 - 1685046 | 102378.0 |
| stress responsive alpha/beta barrel protein | BCL90_1460 | Not Available | Positive | 1685097 - 1685393 | 11442.7 |
| hypothetical protein | BCL90_1461 | Not Available | Positive | 1685600 - 1685797 | 7389.96 |
| protein of unknown function (duf3095) | BCL90_1462 | Not Available | Positive | 1686015 - 1687184 | 43691.8 |
| phospho-acceptor domain-containing protein | BCL90_1463 | Not Available | Positive | 1687298 - 1688443 | 42736.1 |
| succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase | BCL90_1464 | Not Available | Positive | 1688497 - 1689870 | 49646.9 |
| nadph:quinone reductase-like zn-dependent oxidoreductase | BCL90_1465 | Not Available | Positive | 1689882 - 1690811 | 33302.3 |
| cation diffusion facilitator family transporter | BCL90_1466 | Not Available | Negative | 1691017 - 1691958 | 34635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
