Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| baseplate j-like protein | BCL90_1439 | Not Available | Positive | 1655277 - 1658960 | 136661.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1656390 - 1656455 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 1656626 - 1656689 | Not Available |
| hypothetical protein | BCL90_1440 | Not Available | Positive | 1658957 - 1661317 | 88317.7 |
| hypothetical protein | BCL90_1441 | Not Available | Positive | 1661304 - 1664117 | 107537.0 |
| hypothetical protein | BCL90_1442 | Not Available | Positive | 1664231 - 1666303 | 75886.9 |
| hypothetical protein | BCL90_1443 | Not Available | Positive | 1666327 - 1667157 | 29727.8 |
| hypothetical protein | BCL90_1444 | Not Available | Positive | 1667243 - 1668148 | 34762.7 |
| atpase family protein associated with various cellular activities (aaa) | BCL90_1445 | Not Available | Positive | 1668138 - 1669493 | 51540.0 |
| uncharacterized protein duf4157 | BCL90_1446 | Not Available | Positive | 1669504 - 1670427 | 33857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
