Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | BCL90_1420 | Not Available | Positive | 1637678 - 1638685 | 37524.8 |
| sss family solute:na+ symporter | BCL90_1421 | Not Available | Positive | 1638810 - 1640438 | 59638.3 |
| glycosyl hydrolase family 28 | BCL90_1422 | Not Available | Positive | 1640489 - 1641907 | 51569.4 |
| hypothetical protein | BCL90_1423 | Not Available | Negative | 1641967 - 1642251 | 10492.5 |
| tfox/sxy family transcriptional regulator of competence genes | BCL90_1424 | Not Available | Positive | 1642403 - 1642726 | 12212.8 |
| gamma-glutamyltranspeptidase/glutathione hydrolase | BCL90_1425 | Not Available | Positive | 1642890 - 1644770 | 68818.5 |
| hypothetical protein | BCL90_1426 | Not Available | Negative | 1644903 - 1645058 | 5748.79 |
| hypothetical protein | BCL90_1427 | Not Available | Positive | 1645404 - 1646135 | 27214.1 |
| hypothetical protein | BCL90_1428 | Not Available | Positive | 1646356 - 1647240 | 33765.3 |
| uncharacterized protein duf4255 | BCL90_1429 | Not Available | Positive | 1647922 - 1648491 | 21228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
