Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1378 | Not Available | Negative | 1593569 - 1593754 | 6402.12 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1594200 - 1594356 | Not Available |
| hypothetical protein | BCL90_1379 | Not Available | Negative | 1593972 - 1594214 | 9580.13 |
| dna polymerase-4 | BCL90_1380 | Not Available | Positive | 1594232 - 1595542 | 49260.2 |
| dna polymerase iii alpha subunit | BCL90_1381 | Not Available | Positive | 1595545 - 1598556 | 116093.0 |
| fic family protein | BCL90_1382 | Not Available | Positive | 1599015 - 1600166 | 44219.6 |
| bacteriocin resistance ydei/ompd-like protein | BCL90_1383 | Not Available | Positive | 1600179 - 1600688 | 19427.6 |
| dolichol-phosphate mannosyltransferase | BCL90_1384 | Not Available | Negative | 1600777 - 1601532 | 28750.8 |
| pot family proton-dependent oligopeptide transporter | BCL90_1386 | Not Available | Negative | 1602032 - 1603513 | 55342.1 |
| pot family proton-dependent oligopeptide transporter | BCL90_1387 | Not Available | Negative | 1603578 - 1605173 | 58455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
