Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starvation-inducible dna-binding protein | BCL90_1357 | Not Available | Positive | 1569632 - 1570111 | 18431.1 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | BCL90_1358 | Not Available | Positive | 1570218 - 1572053 | 67678.5 |
| hypothetical protein | BCL90_1359 | Not Available | Negative | 1572078 - 1573706 | 63186.4 |
| hypothetical protein | BCL90_1360 | Not Available | Negative | 1573732 - 1573959 | 8422.11 |
| hypothetical protein | BCL90_1361 | Not Available | Negative | 1574006 - 1574332 | 11585.2 |
| hypothetical protein | BCL90_1362 | Not Available | Positive | 1574701 - 1575570 | 32991.8 |
| hypothetical protein | BCL90_1363 | Not Available | Positive | 1575581 - 1576237 | 25564.4 |
| histidine kinase/dna gyrase b/hsp90-like atpase | BCL90_1364 | Not Available | Positive | 1576204 - 1576989 | 29431.8 |
| luxr family two component transcriptional regulator | BCL90_1365 | Not Available | Positive | 1576982 - 1577641 | 24874.1 |
| hypothetical protein | BCL90_1366 | Not Available | Positive | 1577753 - 1578196 | 16531.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
