Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase | BCL90_1336 | Not Available | Negative | 1550518 - 1551864 | 50480.0 |
| hypothetical protein | BCL90_1337 | Not Available | Negative | 1551980 - 1552177 | 6687.86 |
| hypothetical protein | BCL90_1338 | Not Available | Negative | 1552319 - 1552645 | 11970.5 |
| hypothetical protein | BCL90_1339 | Not Available | Negative | 1552670 - 1552888 | 7596.91 |
| hypothetical protein | BCL90_1340 | Not Available | Negative | 1553045 - 1553266 | 7697.08 |
| rna polymerase sigma factor (sigma-70 family) | BCL90_1341 | Not Available | Positive | 1553469 - 1554035 | 21765.9 |
| trypsin-like peptidase | BCL90_1342 | Not Available | Positive | 1554042 - 1555136 | 40321.0 |
| 1-cys peroxiredoxin | BCL90_1343 | Not Available | Positive | 1555299 - 1555934 | 23401.7 |
| putative cold-shock dna-binding protein | BCL90_1344 | Not Available | Positive | 1556072 - 1556335 | 10015.2 |
| hypothetical protein | BCL90_1346 | Not Available | Negative | 1557021 - 1558208 | 44163.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
