Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein motb | BCL90_1325 | Not Available | Positive | 1540603 - 1541466 | 31830.9 |
| hypothetical protein | BCL90_1326 | Not Available | Positive | 1541766 - 1541897 | 4694.61 |
| hypothetical protein | BCL90_1327 | Not Available | Positive | 1541887 - 1542207 | 12176.6 |
| hypothetical protein | BCL90_1328 | Not Available | Positive | 1542354 - 1542569 | 8042.64 |
| pas domain s-box-containing protein | BCL90_1329 | Not Available | Negative | 1542593 - 1544455 | 70642.0 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | BCL90_1330 | Not Available | Positive | 1545101 - 1545667 | 20861.2 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | BCL90_1331 | Not Available | Positive | 1545816 - 1547138 | 49779.9 |
| prolipoprotein diacylglyceryl transferase | BCL90_1333 | Not Available | Positive | 1547641 - 1548792 | 42867.0 |
| myo-inositol-1(or 4)-monophosphatase | BCL90_1334 | Not Available | Positive | 1548851 - 1549639 | 29644.7 |
| fe-s cluster biogenesis protein nfua | BCL90_1335 | Not Available | Negative | 1549879 - 1550430 | 20140.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
