Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | BCL90_1315 | Not Available | Positive | 1524849 - 1527878 | 109416.0 |
| putative outer membrane starch-binding protein | BCL90_1316 | Not Available | Positive | 1527891 - 1529516 | 59980.5 |
| oop family ompa-ompf porin | BCL90_1317 | Not Available | Negative | 1529839 - 1530369 | 19375.2 |
| glucose 1-dehydrogenase | BCL90_1318 | Not Available | Positive | 1530549 - 1531319 | 28067.6 |
| adp-ribose pyrophosphatase yjhb (nudix family) | BCL90_1319 | Not Available | Negative | 1531342 - 1532040 | 26834.6 |
| udpglucose--hexose-1-phosphate uridylyltransferase | BCL90_1320 | Not Available | Positive | 1532202 - 1533263 | 40890.4 |
| galactokinase | BCL90_1321 | Not Available | Positive | 1533274 - 1534425 | 42413.1 |
| nucleolin | BCL90_1322 | Not Available | Negative | 1534959 - 1535273 | 11511.2 |
| sialate o-acetylesterase | BCL90_1323 | Not Available | Positive | 1535493 - 1537478 | 73249.6 |
| duf1680 family protein | BCL90_1324 | Not Available | Positive | 1538019 - 1540529 | 93446.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
