Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1305 | Not Available | Positive | 1508105 - 1508329 | 7647.99 |
| patatin-like phospholipase | BCL90_1306 | Not Available | Positive | 1508448 - 1510865 | 91758.0 |
| selenoprotein w-related protein | BCL90_1307 | Not Available | Positive | 1510920 - 1511201 | 10555.0 |
| signal transduction histidine kinase | BCL90_1308 | Not Available | Positive | 1511401 - 1515411 | 153342.0 |
| putative bnr repeat neuraminidase | BCL90_1309 | Not Available | Positive | 1515551 - 1516873 | 49563.7 |
| glycosyl hydrolase family 43 | BCL90_1310 | Not Available | Positive | 1516890 - 1519061 | 81609.8 |
| rhamnogalacturonyl hydrolase yesr | BCL90_1311 | Not Available | Positive | 1519061 - 1520194 | 44051.2 |
| uncharacterized protein duf2264 | BCL90_1312 | Not Available | Positive | 1520209 - 1521456 | 47107.8 |
| glycosyl hydrolase family 43 | BCL90_1313 | Not Available | Positive | 1521525 - 1522646 | 41764.8 |
| beta-galactosidase | BCL90_1314 | Not Available | Positive | 1522760 - 1524595 | 68956.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
