Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BCL90_1256 | Not Available | Positive | 1440883 - 1442007 | 43692.0 |
| lyttr family two component transcriptional regulator | BCL90_1257 | Not Available | Positive | 1442004 - 1442705 | 27032.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1442531 - 1442606 | Not Available |
| uncharacterized protein duf4932 | BCL90_1258 | Not Available | Positive | 1443031 - 1444122 | 42322.6 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_1259 | Not Available | Positive | 1444520 - 1446010 | 54985.5 |
| dual-action heigh metallo-peptidase | BCL90_1260 | Not Available | Positive | 1446357 - 1447451 | 39387.2 |
| pectate lyase | BCL90_1261 | Not Available | Negative | 1447595 - 1448707 | 39204.1 |
| glycosyl transferase family 2 | BCL90_1262 | Not Available | Positive | 1449171 - 1451033 | 71546.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1451770 - 1451864 | Not Available |
| fad dependent oxidoreductase tigr03364 | BCL90_1263 | Not Available | Negative | 1451198 - 1452328 | 41544.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
