Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf1801 | BCL90_1246 | Not Available | Positive | 1429868 - 1430239 | 14697.3 |
| lyttr family two component transcriptional regulator | BCL90_1247 | Not Available | Negative | 1430243 - 1430950 | 27126.4 |
| histidine kinase | BCL90_1248 | Not Available | Negative | 1430947 - 1431738 | 31182.9 |
| abc-type multidrug transport system atpase subunit | BCL90_1249 | Not Available | Positive | 1431940 - 1432812 | 32224.6 |
| peptidase m1-like protein | BCL90_1250 | Not Available | Positive | 1432824 - 1436099 | 125395.0 |
| helix-turn-helix protein | BCL90_1251 | Not Available | Negative | 1436154 - 1437065 | 35360.3 |
| hypothetical protein | BCL90_1252 | Not Available | Negative | 1437095 - 1437898 | 28946.4 |
| hypothetical protein | BCL90_1253 | Not Available | Positive | 1438108 - 1438248 | 5247.64 |
| wd40 repeat protein | BCL90_1254 | Not Available | Negative | 1438501 - 1439394 | 33976.7 |
| tetratricopeptide repeat protein | BCL90_1255 | Not Available | Negative | 1439434 - 1440651 | 45623.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
