Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor-like protein | BCL90_1220 | Not Available | Positive | 1398589 - 1401759 | 114677.0 |
| astacin (peptidase family m12a) | BCL90_1221 | Not Available | Positive | 1402135 - 1403340 | 45321.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | BCL90_1222 | Not Available | Negative | 1403857 - 1405038 | 43172.4 |
| glutamine synthetase | BCL90_1224 | Not Available | Negative | 1406413 - 1408710 | 86014.4 |
| outer membrane transport energization protein tonb | BCL90_1225 | Not Available | Positive | 1408790 - 1409629 | 30566.8 |
| phosphoribosylformylglycinamidine synthase | BCL90_1226 | Not Available | Negative | 1410508 - 1414170 | 134043.0 |
| glyoxylase i family protein | BCL90_1227 | Not Available | Positive | 1414429 - 1414812 | 14846.6 |
| trna1val (adenine37-n6)-methyltransferase | BCL90_1228 | Not Available | Positive | 1414814 - 1415515 | 26315.6 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_1229 | Not Available | Positive | 1416149 - 1417960 | 67743.2 |
| hypothetical protein | BCL90_1230 | Not Available | Positive | 1418156 - 1418647 | 18431.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
