Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BCL90_1196 | Not Available | Negative | 1367814 - 1368887 | 41417.6 |
| lyttr family two component transcriptional regulator | BCL90_1197 | Not Available | Negative | 1369135 - 1369881 | 29030.0 |
| hypothetical protein | BCL90_1198 | Not Available | Positive | 1370453 - 1370722 | 9807.69 |
| type ix secretion system porp/sprf family membrane protein | BCL90_1202 | Not Available | Negative | 1373709 - 1374629 | 34033.4 |
| gliding motility-associated-like protein | BCL90_1203 | Not Available | Negative | 1374638 - 1380409 | 198914.0 |
| trna threonylcarbamoyl adenosine modification protein (sua5/ycio/yrdc/ywlc family) | BCL90_1205 | Not Available | Negative | 1381022 - 1381642 | 23102.7 |
| antitoxin yefm | BCL90_1206 | Not Available | Positive | 1381771 - 1382028 | 9813.55 |
| toxin yoeb | BCL90_1207 | Not Available | Positive | 1382021 - 1382275 | 10212.3 |
| glutamate synthase domain-containing protein 2 | BCL90_1208 | Not Available | Positive | 1382289 - 1383950 | 60696.9 |
| hypothetical protein | BCL90_1209 | Not Available | Negative | 1384029 - 1384667 | 23699.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
