Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1154 | Not Available | Negative | 1332380 - 1333255 | 33659.5 |
| nudix domain-containing protein | BCL90_1155 | Not Available | Positive | 1333717 - 1334328 | 23883.2 |
| hypothetical protein | BCL90_1156 | Not Available | Negative | 1334517 - 1335122 | 23995.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1157 | Not Available | Negative | 1335112 - 1335615 | 19785.0 |
| phosphopantetheine adenylyltransferase | BCL90_1158 | Not Available | Negative | 1335933 - 1336394 | 17212.0 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | BCL90_1160 | Not Available | Negative | 1336735 - 1337271 | 20191.4 |
| uncharacterized protein duf3822 | BCL90_1161 | Not Available | Negative | 1337262 - 1338068 | 30707.0 |
| hypothetical protein | BCL90_1162 | Not Available | Positive | 1338534 - 1339673 | 41794.5 |
| exodeoxyribonuclease-5 | BCL90_1164 | Not Available | Positive | 1339926 - 1341359 | 54510.4 |
| chemoreceptor-like protein with four helix bundle sensory module | BCL90_1165 | Not Available | Positive | 1341511 - 1342182 | 24945.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
