Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative secreted protein (por secretion system target) | BCL90_1134 | Not Available | Positive | 1308358 - 1311183 | 103190.0 |
| zn-dependent m28 family amino/carboxypeptidase | BCL90_1135 | Not Available | Positive | 1311421 - 1313073 | 60626.4 |
| outer membrane protein w | BCL90_1136 | Not Available | Negative | 1313155 - 1313757 | 21276.3 |
| chromate reductase | BCL90_1137 | Not Available | Negative | 1314076 - 1314633 | 20359.8 |
| fsr family fosmidomycin resistance protein-like mfs transporter | BCL90_1138 | Not Available | Positive | 1314737 - 1315939 | 43371.1 |
| hypothetical protein | BCL90_1139 | Not Available | Negative | 1315993 - 1316634 | 23644.5 |
| hypothetical protein | BCL90_1140 | Not Available | Negative | 1316799 - 1317428 | 24005.5 |
| outer membrane protein with beta-barrel domain | BCL90_1141 | Not Available | Negative | 1317440 - 1318093 | 24838.3 |
| enhancin-like peptidase m60 family | BCL90_1142 | Not Available | Negative | 1318220 - 1320406 | 83292.7 |
| atp-dependent clp protease atp-binding subunit clpb | BCL90_1143 | Not Available | Negative | 1320781 - 1323381 | 97585.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
