Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1114 | Not Available | Positive | 1286945 - 1287073 | 4514.51 |
| lysozyme | BCL90_1115 | Not Available | Positive | 1287424 - 1288320 | 34775.3 |
| o-succinylbenzoate synthase | BCL90_1116 | Not Available | Negative | 1288817 - 1289914 | 40829.1 |
| hypothetical protein | BCL90_1117 | Not Available | Positive | 1290167 - 1292176 | 76315.1 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | BCL90_1118 | Not Available | Positive | 1292187 - 1292693 | 18003.9 |
| uma2 family endonuclease | BCL90_1119 | Not Available | Negative | 1292780 - 1293400 | 23479.1 |
| uma2 family endonuclease | BCL90_1120 | Not Available | Negative | 1293411 - 1294040 | 24087.9 |
| hypothetical protein | BCL90_1121 | Not Available | Negative | 1294080 - 1295300 | 44747.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1122 | Not Available | Negative | 1295293 - 1295877 | 22370.9 |
| uncharacterized protein duf4397 | BCL90_1123 | Not Available | Negative | 1295998 - 1296693 | 24924.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
