Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 1254982 - 1255050 | Not Available |
| putative secreted protein (por secretion system target) | BCL90_1083 | Not Available | Negative | 1254205 - 1256313 | 76558.2 |
| hypothetical protein | BCL90_1084 | Not Available | Negative | 1256354 - 1256755 | 14999.0 |
| apolipoprotein d and lipocalin family protein | BCL90_1085 | Not Available | Negative | 1257676 - 1258230 | 20968.0 |
| Trna-leu | Not Available | Not Available | Positive | 1258576 - 1258659 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1258728 - 1258803 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1259047 - 1259130 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1259200 - 1259275 | Not Available |
| regulatory protein | BCL90_1090 | Not Available | Negative | 1259370 - 1259858 | 18676.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BCL90_1091 | Not Available | Positive | 1259920 - 1262379 | 91905.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
