Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sialidase-1 | BCL90_1071 | Not Available | - | 1244711 - 1244899 | 6910.38 |
| putative purr-regulated permease perm | BCL90_1074 | Not Available | - | 1245277 - 1246368 | 39866.9 |
| s-formylglutathione hydrolase frmb | BCL90_1075 | Not Available | + | 1246550 - 1247368 | 30801.9 |
| two-component system phosphate regulon response regulator phob/two-component system alkaline phosphatase synthesis response regulator phop | BCL90_1076 | Not Available | - | 1247372 - 1247749 | 13898.0 |
| hypothetical protein | BCL90_1077 | Not Available | + | 1248011 - 1248265 | 9622.22 |
| hypothetical protein | BCL90_1078 | Not Available | - | 1248389 - 1248592 | 7796.82 |
| glucokinase | BCL90_1079 | Not Available | + | 1248721 - 1249692 | 34488.2 |
| putative secreted protein (por secretion system target) | BCL90_1080 | Not Available | - | 1250354 - 1252408 | 74976.8 |
| hypothetical protein | BCL90_1081 | Not Available | - | 1252537 - 1252908 | 13477.5 |
| hypothetical protein | BCL90_1082 | Not Available | - | 1253064 - 1254203 | 40928.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
